BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D08LP1|AL428719
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1063 1758 0.0
>3x_Contig1063
Length = 5012
Score = 1758 bits (887), Expect = 0.0
Identities = 897/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Minus
Query: 1 ctaccagacggatctataattgcgcaggacgaaggtc-tagaaagggcgtcactttcgaa 59
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4262 ctaccagacggatctataattgcgcaggacgaaggtcctagaaagggcgtcactttcgaa 4203
Query: 60 tcgttacaaaagattaaacctgcatttgtgaaggaaacaggtgtgacaactgccggtaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4202 tcgttacaaaagattaaacctgcatttgtgaaggaaacaggtgtgacaactgccggtaac 4143
Query: 120 gcttctcagatatcagatggtgttgctggtgtgttgctaatgagaagatccatggccatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4142 gcttctcagatatcagatggtgttgctggtgtgttgctaatgagaagatccatggccatg 4083
Query: 180 aaattgggtttggaaatcgttggtaagtacgttgcgttccaggcagtaggtgttccacct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4082 aaattgggtttggaaatcgttggtaagtacgttgcgttccaggcagtaggtgttccacct 4023
Query: 240 gagatcatgggtgttggcccagcatatgcgattccaagagtcctcaaagactgtggttta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4022 gagatcatgggtgttggcccagcatatgcgattccaagagtcctcaaagactgtggttta 3963
Query: 300 aatgtcaacgatgttgatgtttacgagattaatgaggcctttgcagggcaggccattttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3962 aatgtcaacgatgttgatgtttacgagattaatgaggcctttgcagggcaggccattttc 3903
Query: 360 tgtgtcaaccatctaaaaatcgacaagaagaaattgaacccaaggggaggcgcgattgcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3902 tgtgtcaaccatctaaaaatcgacaagaagaaattgaacccaaggggaggcgcgattgcc 3843
Query: 420 ttaggtcatcctttgggctgcactggtgccagacaagtcgctaccatattaagggaatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3842 ttaggtcatcctttgggctgcactggtgccagacaagtcgctaccatattaagggaatta 3783
Query: 480 gacgctggtcaaattggtgttgttagcatgtgtatcggtactggtatgggagctgctgca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3782 gacgctggtcaaattggtgttgttagcatgtgtatcggtactggtatgggagctgctgca 3723
Query: 540 gtcttcgtcaaggagtgagttaatattaacgtgtgtataatgtagtttccctcttctgta 599
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3722 gtcttcgtcaaggagtgagtgaatattaacgtgtgtataatgtagtttccctcttctgta 3663
Query: 600 atgaccatttcgatgaatatgatgagtaactcatattattcgctactgtgtttttttttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3662 atgaccatttcgatgaatatgatgagtaactcatattattcgctactgtgtttttttttc 3603
Query: 660 aatcagagagttttgacatcagattcttctgtaccgtgtccctatttatatactccggag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3602 aatcagagagttttgacatcagattcttctgtaccgtgtccctatttatatactccggag 3543
Query: 720 actgcaaagaattccagttggtaaccaaatagtttaattgtataactagcggctgtttat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3542 actgcaaagaattccagttggtaaccaaatagtttaattgtataactagcggctgtttat 3483
Query: 780 ctttgagtaaagcttttgatttataattgaaattgtttacaattcgtgataacgggtcat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 ctttgagtaaagcttttgatttataattgaaattgtttacaattcgtgataacgggtcat 3423
Query: 840 ctgaagaacagtctttcggtttacttagctttatggcggattgaggataatcgaccgga 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 ctgaagaacagtctttcggtttacttagctttatggcggattgaggataatcgaccgga 3364
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6525
Number of Sequences: 1807
Number of extensions: 6525
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)